Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.61■□□□□ 0.09
PTPN6P29350 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTPN6P29350 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.61■□□□□ 0.09
PTPN6P29350 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PTPN6P29350 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTPN6P29350 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.6■□□□□ 0.09
PTPN6P29350 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTPN6P29350 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PTPN6P29350 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 MRPL20P1-201ENST00000400819 433 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 PRSS29P-201ENST00000440800 595 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.6■□□□□ 0.09
PTPN6P29350 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.6■□□□□ 0.09
PTPN6P29350 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.6■□□□□ 0.09
PTPN6P29350 OR7E47P-204ENST00000575924 449 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 MIR4751-201ENST00000578027 74 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 AC020765.3-201ENST00000613051 740 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 AP001350.2-201ENST00000625104 1094 ntBASIC15.6■□□□□ 0.09
PTPN6P29350 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.6■□□□□ 0.09
PTPN6P29350 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN6P29350 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTPN6P29350 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTPN6P29350 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
PTPN6P29350 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 MIR940-201ENST00000401276 94 ntBASIC15.59■□□□□ 0.09
PTPN6P29350 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.59■□□□□ 0.09
PTPN6P29350 AC007967.2-201ENST00000432613 625 ntBASIC15.59■□□□□ 0.09
PTPN6P29350 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.59■□□□□ 0.09
PTPN6P29350 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTPN6P29350 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN6P29350 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN6P29350 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN6P29350 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
PTPN6P29350 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.58■□□□□ 0.09
PTPN6P29350 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PTPN6P29350 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.58■□□□□ 0.09
PTPN6P29350 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms