Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.83■□□□□ 0.77
KCNA3P22001 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.83■□□□□ 0.77
KCNA3P22001 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 AC093433.1-201ENST00000458048 571 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.83■□□□□ 0.77
KCNA3P22001 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 ACTG1P17-201ENST00000558391 1119 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.83■□□□□ 0.77
KCNA3P22001 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.83■□□□□ 0.77
KCNA3P22001 MIR4321-201ENST00000592276 80 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.83■□□□□ 0.77
KCNA3P22001 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KCNA3P22001 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
KCNA3P22001 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
KCNA3P22001 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.83■□□□□ 0.76
KCNA3P22001 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCNA3P22001 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCNA3P22001 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
KCNA3P22001 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
KCNA3P22001 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
KCNA3P22001 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
KCNA3P22001 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.82■□□□□ 0.76
KCNA3P22001 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KCNA3P22001 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
KCNA3P22001 MIR6727-201ENST00000620702 65 ntBASIC19.82■□□□□ 0.76
KCNA3P22001 AC005252.2-201ENST00000624630 1141 ntBASIC19.82■□□□□ 0.76
KCNA3P22001 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.82■□□□□ 0.76
KCNA3P22001 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KCNA3P22001 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
KCNA3P22001 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.82■□□□□ 0.76
KCNA3P22001 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCNA3P22001 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.82■□□□□ 0.76
KCNA3P22001 U82695.1-201ENST00000635752 1889 ntBASIC19.82■□□□□ 0.76
KCNA3P22001 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 AL645728.1-201ENST00000366221 2101 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
KCNA3P22001 AZGP1P1-201ENST00000411909 902 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 SOCS2P1-201ENST00000417727 557 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 CNN2P8-201ENST00000421872 913 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.81■□□□□ 0.76
KCNA3P22001 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 AC104306.2-201ENST00000451877 341 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 AC105129.2-201ENST00000559536 390 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 AC009486.1-201ENST00000569860 813 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.81■□□□□ 0.76
KCNA3P22001 AL365330.1-201ENST00000607459 531 ntBASIC19.81■□□□□ 0.76
KCNA3P22001 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KCNA3P22001 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNA3P22001 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KCNA3P22001 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNA3P22001 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNA3P22001 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KCNA3P22001 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
KCNA3P22001 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KCNA3P22001 AKR7A2P1-201ENST00000460134 915 ntBASIC19.8■□□□□ 0.76
KCNA3P22001 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNA3P22001 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
KCNA3P22001 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.8■□□□□ 0.76
KCNA3P22001 AC120045.2-201ENST00000567334 178 ntBASIC19.8■□□□□ 0.76
KCNA3P22001 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNA3P22001 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms