Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.3■□□□□ 0.2
NELFEP18615 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.3■□□□□ 0.2
NELFEP18615 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.3■□□□□ 0.2
NELFEP18615 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NELFEP18615 CYP2T1P-202ENST00000641596 2535 ntBASIC16.29■□□□□ 0.2
NELFEP18615 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NELFEP18615 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NELFEP18615 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NELFEP18615 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.29■□□□□ 0.2
NELFEP18615 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.29■□□□□ 0.2
NELFEP18615 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.29■□□□□ 0.2
NELFEP18615 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NELFEP18615 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
NELFEP18615 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 AL513523.2-202ENST00000427283 2040 ntBASIC16.29■□□□□ 0.2
NELFEP18615 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 AC092053.1-201ENST00000605787 1936 ntBASIC16.29■□□□□ 0.2
NELFEP18615 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NELFEP18615 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.29■□□□□ 0.2
NELFEP18615 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NELFEP18615 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.28■□□□□ 0.2
NELFEP18615 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NELFEP18615 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 AC022188.1-201ENST00000620960 1664 ntBASIC16.28■□□□□ 0.2
NELFEP18615 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NELFEP18615 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NELFEP18615 PMS2P2-201ENST00000425039 1128 ntBASIC16.28■□□□□ 0.2
NELFEP18615 CNN2P11-201ENST00000429351 262 ntBASIC16.28■□□□□ 0.2
NELFEP18615 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NELFEP18615 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.28■□□□□ 0.2
NELFEP18615 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms