Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
ERCC2P18074 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
ERCC2P18074 SPDYE9P-201ENST00000570642 692 ntBASIC16.89■□□□□ 0.29
ERCC2P18074 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.89■□□□□ 0.29
ERCC2P18074 AC010327.4-202ENST00000591484 748 ntBASIC16.89■□□□□ 0.29
ERCC2P18074 SPDYE10P-202ENST00000612005 668 ntBASIC16.89■□□□□ 0.29
ERCC2P18074 SPDYE8P-202ENST00000612377 668 ntBASIC16.89■□□□□ 0.29
ERCC2P18074 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.89■□□□□ 0.29
ERCC2P18074 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC2P18074 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC2P18074 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ERCC2P18074 AC026691.1-201ENST00000602502 2017 ntBASIC16.89■□□□□ 0.29
ERCC2P18074 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC2P18074 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC2P18074 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC2P18074 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 RPSAP43-201ENST00000402237 625 ntBASIC16.88■□□□□ 0.29
ERCC2P18074 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 RN7SL589P-201ENST00000481268 310 ntBASIC16.88■□□□□ 0.29
ERCC2P18074 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 AC027307.2-201ENST00000591252 911 ntBASIC16.88■□□□□ 0.29
ERCC2P18074 AC073389.1-201ENST00000595595 795 ntBASIC16.88■□□□□ 0.29
ERCC2P18074 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC2P18074 AC018695.7-201ENST00000624587 2492 ntBASIC16.88■□□□□ 0.29
ERCC2P18074 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC2P18074 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC2P18074 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 UPF3AP3-201ENST00000420996 769 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 TIMM8BP1-201ENST00000452384 211 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.87■□□□□ 0.29
ERCC2P18074 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.87■□□□□ 0.29
ERCC2P18074 AC079140.1-201ENST00000508039 487 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 YBX1P5-201ENST00000509441 847 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.87■□□□□ 0.29
ERCC2P18074 AC092865.5-201ENST00000545435 363 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.87■□□□□ 0.29
ERCC2P18074 MIR4469-201ENST00000583919 79 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 AC008267.7-201ENST00000624570 1194 ntBASIC16.87■□□□□ 0.29
ERCC2P18074 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ERCC2P18074 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ERCC2P18074 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms