Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
GAP43P17677 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GAP43P17677 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GAP43P17677 PCDH8P1-201ENST00000428983 2773 ntBASIC18.08■□□□□ 0.48
GAP43P17677 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.07■□□□□ 0.48
GAP43P17677 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GAP43P17677 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 MIR346-201ENST00000362234 95 ntBASIC18.07■□□□□ 0.48
GAP43P17677 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.48
GAP43P17677 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.07■□□□□ 0.48
GAP43P17677 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.07■□□□□ 0.48
GAP43P17677 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.07■□□□□ 0.48
GAP43P17677 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.07■□□□□ 0.48
GAP43P17677 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 AC092865.5-201ENST00000545435 363 ntBASIC18.07■□□□□ 0.48
GAP43P17677 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
GAP43P17677 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.07■□□□□ 0.48
GAP43P17677 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.07■□□□□ 0.48
GAP43P17677 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.07■□□□□ 0.48
GAP43P17677 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAP43P17677 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 AL391005.1-201ENST00000623953 2435 ntBASIC18.06■□□□□ 0.48
GAP43P17677 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 MIR648-201ENST00000385046 94 ntBASIC18.06■□□□□ 0.48
GAP43P17677 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.06■□□□□ 0.48
GAP43P17677 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
GAP43P17677 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 AC142381.1-201ENST00000426099 345 ntBASIC18.06■□□□□ 0.48
GAP43P17677 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.06■□□□□ 0.48
GAP43P17677 AL592309.1-201ENST00000443127 649 ntBASIC18.06■□□□□ 0.48
GAP43P17677 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.06■□□□□ 0.48
GAP43P17677 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 AP000842.3-202ENST00000569238 1080 ntBASIC18.06■□□□□ 0.48
GAP43P17677 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.06■□□□□ 0.48
GAP43P17677 AC022145.2-201ENST00000598203 171 ntBASIC18.06■□□□□ 0.48
GAP43P17677 AL513210.1-201ENST00000629608 234 ntBASIC18.06■□□□□ 0.48
GAP43P17677 AC084121.4-201ENST00000641598 221 ntBASIC18.06■□□□□ 0.48
GAP43P17677 AF228730.8-201ENST00000642140 221 ntBASIC18.06■□□□□ 0.48
GAP43P17677 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 FOXO1B-201ENST00000504678 1527 ntBASIC18.06■□□□□ 0.48
GAP43P17677 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GAP43P17677 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAP43P17677 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.06■□□□□ 0.48
GAP43P17677 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.05■□□□□ 0.48
GAP43P17677 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAP43P17677 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms