Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NCK1P16333 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NCK1P16333 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.57■□□□□ 0.08
NCK1P16333 PMS2P1-201ENST00000431037 1228 ntBASIC15.57■□□□□ 0.08
NCK1P16333 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.57■□□□□ 0.08
NCK1P16333 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.57■□□□□ 0.08
NCK1P16333 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 AC010654.1-201ENST00000615722 808 ntBASIC15.57■□□□□ 0.08
NCK1P16333 AL121956.5-201ENST00000625261 221 ntBASIC15.57■□□□□ 0.08
NCK1P16333 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NCK1P16333 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NCK1P16333 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 NUS1P2-201ENST00000417358 873 ntBASIC15.56■□□□□ 0.08
NCK1P16333 POM121L3P-201ENST00000419331 1163 ntBASIC15.56■□□□□ 0.08
NCK1P16333 PAWRP1-201ENST00000451083 565 ntBASIC15.56■□□□□ 0.08
NCK1P16333 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 AP000867.3-201ENST00000524675 377 ntBASIC15.56■□□□□ 0.08
NCK1P16333 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 MIR5100-201ENST00000579544 119 ntBASIC15.56■□□□□ 0.08
NCK1P16333 LINC01023-201ENST00000606054 436 ntBASIC15.56■□□□□ 0.08
NCK1P16333 REXO1L3P-201ENST00000622202 1288 ntBASIC15.56■□□□□ 0.08
NCK1P16333 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 SLC22A20-204ENST00000530038 1673 ntBASIC15.56■□□□□ 0.08
NCK1P16333 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.56■□□□□ 0.08
NCK1P16333 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.56■□□□□ 0.08
NCK1P16333 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.56■□□□□ 0.08
NCK1P16333 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NCK1P16333 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms