Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.72■□□□□ 0.11
BCKDHAP12694 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCKDHAP12694 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.72■□□□□ 0.11
BCKDHAP12694 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.72■□□□□ 0.11
BCKDHAP12694 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCKDHAP12694 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCKDHAP12694 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BCKDHAP12694 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BCKDHAP12694 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 AC069224.1-201ENST00000566372 1715 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BCKDHAP12694 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.71■□□□□ 0.11
BCKDHAP12694 AP005117.1-202ENST00000581724 1908 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 MIR648-201ENST00000385046 94 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 AL513480.1-201ENST00000451731 511 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.71■□□□□ 0.11
BCKDHAP12694 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.71■□□□□ 0.11
BCKDHAP12694 AL049840.3-201ENST00000602669 611 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
BCKDHAP12694 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.71■□□□□ 0.11
BCKDHAP12694 AL645728.2-201ENST00000641974 660 ntBASIC15.71■□□□□ 0.11
BCKDHAP12694 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BCKDHAP12694 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
BCKDHAP12694 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BCKDHAP12694 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BCKDHAP12694 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BCKDHAP12694 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BCKDHAP12694 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BCKDHAP12694 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BCKDHAP12694 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.7■□□□□ 0.1
BCKDHAP12694 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.7■□□□□ 0.1
BCKDHAP12694 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.7■□□□□ 0.1
BCKDHAP12694 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BCKDHAP12694 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 PMS2P4-201ENST00000412466 1052 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BCKDHAP12694 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 AL031432.2-201ENST00000566714 459 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 AL928711.1-201ENST00000570165 459 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 MIR3909-201ENST00000579518 119 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 RN7SL510P-201ENST00000581311 263 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BCKDHAP12694 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 MIR7706-201ENST00000613747 67 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 AL773604.1-201ENST00000617417 272 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 AL031008.1-201ENST00000619963 541 ntBASIC15.7■□□□□ 0.1
BCKDHAP12694 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.7■□□□□ 0.1
BCKDHAP12694 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.7■□□□□ 0.1
BCKDHAP12694 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BCKDHAP12694 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms