Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.84■□□□□ 0.61
BMP3P12645 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.84■□□□□ 0.61
BMP3P12645 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.84■□□□□ 0.61
BMP3P12645 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 SPDYE17-201ENST00000412399 783 ntBASIC18.84■□□□□ 0.61
BMP3P12645 AC015922.1-201ENST00000421102 1152 ntBASIC18.84■□□□□ 0.61
BMP3P12645 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.84■□□□□ 0.61
BMP3P12645 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
BMP3P12645 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.84■□□□□ 0.61
BMP3P12645 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.84■□□□□ 0.61
BMP3P12645 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BMP3P12645 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
BMP3P12645 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
BMP3P12645 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.84■□□□□ 0.61
BMP3P12645 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
BMP3P12645 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BMP3P12645 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP3P12645 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP3P12645 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP3P12645 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP3P12645 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP3P12645 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
BMP3P12645 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BMP3P12645 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.83■□□□□ 0.61
BMP3P12645 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
BMP3P12645 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.83■□□□□ 0.6
BMP3P12645 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.83■□□□□ 0.6
BMP3P12645 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.83■□□□□ 0.6
BMP3P12645 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
BMP3P12645 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP3P12645 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.83■□□□□ 0.6
BMP3P12645 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.83■□□□□ 0.6
BMP3P12645 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP3P12645 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.83■□□□□ 0.6
BMP3P12645 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BMP3P12645 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP3P12645 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP3P12645 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP3P12645 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.82■□□□□ 0.6
BMP3P12645 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.82■□□□□ 0.6
BMP3P12645 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
BMP3P12645 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 SPTLC1P1-201ENST00000447199 261 ntBASIC18.82■□□□□ 0.6
BMP3P12645 RN7SL618P-201ENST00000477850 296 ntBASIC18.82■□□□□ 0.6
BMP3P12645 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BMP3P12645 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.82■□□□□ 0.6
BMP3P12645 AL512361.1-201ENST00000554200 418 ntBASIC18.82■□□□□ 0.6
BMP3P12645 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
BMP3P12645 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.82■□□□□ 0.6
BMP3P12645 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.82■□□□□ 0.6
BMP3P12645 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.82■□□□□ 0.6
BMP3P12645 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.82■□□□□ 0.6
BMP3P12645 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.82■□□□□ 0.6
BMP3P12645 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 FLJ38576-201ENST00000623820 2459 ntBASIC18.82■□□□□ 0.6
BMP3P12645 AC092171.3-201ENST00000610122 2651 ntBASIC18.82■□□□□ 0.6
BMP3P12645 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP3P12645 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.81■□□□□ 0.6
BMP3P12645 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 SERBP1P3-201ENST00000459980 809 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms