Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.84□□□□□ -0.35
CD28P10747 HLA-H-201ENST00000383620 1096 ntBASIC12.84□□□□□ -0.35
CD28P10747 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.84□□□□□ -0.35
CD28P10747 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 FAM207CP-201ENST00000443486 507 ntBASIC12.84□□□□□ -0.35
CD28P10747 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.84□□□□□ -0.35
CD28P10747 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.84□□□□□ -0.35
CD28P10747 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 AC013467.2-201ENST00000605472 835 ntBASIC12.84□□□□□ -0.35
CD28P10747 AC007967.4-201ENST00000614700 386 ntBASIC12.84□□□□□ -0.35
CD28P10747 SPTSSB-204ENST00000617024 1292 ntBASIC12.84□□□□□ -0.35
CD28P10747 AL590560.3-201ENST00000623350 461 ntBASIC12.84□□□□□ -0.35
CD28P10747 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.84□□□□□ -0.35
CD28P10747 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 AC100757.3-201ENST00000622361 1406 ntBASIC12.84□□□□□ -0.35
CD28P10747 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
CD28P10747 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CD28P10747 AC141586.5-201ENST00000624546 2050 ntBASIC12.84□□□□□ -0.35
CD28P10747 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CD28P10747 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.84□□□□□ -0.35
CD28P10747 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CD28P10747 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.83□□□□□ -0.35
CD28P10747 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.83□□□□□ -0.36
CD28P10747 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CD28P10747 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 KRT8P39-201ENST00000396270 1433 ntBASIC12.83□□□□□ -0.36
CD28P10747 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.83□□□□□ -0.36
CD28P10747 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.83□□□□□ -0.36
CD28P10747 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.83□□□□□ -0.36
CD28P10747 AC004890.2-204ENST00000481968 304 ntBASIC12.83□□□□□ -0.36
CD28P10747 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD28P10747 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.83□□□□□ -0.36
CD28P10747 AL138828.2-201ENST00000615812 383 ntBASIC12.83□□□□□ -0.36
CD28P10747 AL645608.8-201ENST00000606034 2086 ntBASIC12.83□□□□□ -0.36
CD28P10747 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD28P10747 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.83□□□□□ -0.36
CD28P10747 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CD28P10747 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD28P10747 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.82□□□□□ -0.36
CD28P10747 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CD28P10747 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CD28P10747 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD28P10747 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD28P10747 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms