Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 AL031055.1-201ENST00000606362 631 ntBASIC17.26■□□□□ 0.35
RARAP10276 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.26■□□□□ 0.35
RARAP10276 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RARAP10276 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RARAP10276 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RARAP10276 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 POU5F1P6-201ENST00000466990 990 ntBASIC17.25■□□□□ 0.35
RARAP10276 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.25■□□□□ 0.35
RARAP10276 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.25■□□□□ 0.35
RARAP10276 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 AC064836.3-201ENST00000607928 673 ntBASIC17.25■□□□□ 0.35
RARAP10276 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.25■□□□□ 0.35
RARAP10276 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RARAP10276 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RARAP10276 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.25■□□□□ 0.35
RARAP10276 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RARAP10276 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.24■□□□□ 0.35
RARAP10276 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 AL590627.1-203ENST00000421194 1026 ntBASIC17.24■□□□□ 0.35
RARAP10276 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 KRT18P2-201ENST00000447938 1258 ntBASIC17.24■□□□□ 0.35
RARAP10276 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.24■□□□□ 0.35
RARAP10276 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.24■□□□□ 0.35
RARAP10276 AC020765.3-201ENST00000613051 740 ntBASIC17.24■□□□□ 0.35
RARAP10276 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RARAP10276 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RARAP10276 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RARAP10276 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms