Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 C8orf49-201ENST00000525043 1968 ntBASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC246785.2-201ENST00000432512 513 ntBASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC104076.2-201ENST00000448912 469 ntBASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AL671277.2-201ENST00000458060 996 ntBASIC14.21□□□□□ -0.13
HLA-DQB1P01920 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DQB1P01920 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 AL137784.3-201ENST00000623858 2288 ntBASIC14.21□□□□□ -0.14
HLA-DQB1P01920 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DQB1P01920 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 AL020989.1-201ENST00000422979 469 ntBASIC14.2□□□□□ -0.14
HLA-DQB1P01920 MIR4492-201ENST00000581627 80 ntBASIC14.2□□□□□ -0.14
HLA-DQB1P01920 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 AC010654.1-201ENST00000615722 808 ntBASIC14.2□□□□□ -0.14
HLA-DQB1P01920 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 TOP3BP1-201ENST00000420768 1380 ntBASIC14.2□□□□□ -0.14
HLA-DQB1P01920 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms