Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.15■□□□□ 0.18
CPNE6O95741 KRT8P49-201ENST00000604166 1432 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 AC008267.7-201ENST00000624570 1194 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE6O95741 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE6O95741 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE6O95741 AC132872.4-202ENST00000622924 2756 ntBASIC16.15■□□□□ 0.18
CPNE6O95741 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE6O95741 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE6O95741 AC005052.1-201ENST00000625181 2492 ntBASIC16.14■□□□□ 0.18
CPNE6O95741 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
CPNE6O95741 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CPNE6O95741 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE6O95741 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE6O95741 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE6O95741 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 KLF2P3-201ENST00000451977 1087 ntBASIC16.14■□□□□ 0.17
CPNE6O95741 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE6O95741 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE6O95741 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE6O95741 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE6O95741 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CPNE6O95741 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE6O95741 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE6O95741 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 AC093214.1-201ENST00000511688 1107 ntBASIC16.13■□□□□ 0.17
CPNE6O95741 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 AC026150.2-201ENST00000564693 1156 ntBASIC16.13■□□□□ 0.17
CPNE6O95741 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE6O95741 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CPNE6O95741 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CPNE6O95741 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 FRMD8P1-201ENST00000440433 1524 ntBASIC16.13■□□□□ 0.17
CPNE6O95741 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE6O95741 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE6O95741 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE6O95741 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms