Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 AC006001.1-201ENST00000325130 474 ntBASIC17.24■□□□□ 0.35
SOX1O00570 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SOX1O00570 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX1O00570 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.24■□□□□ 0.35
SOX1O00570 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.24■□□□□ 0.35
SOX1O00570 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX1O00570 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.24■□□□□ 0.35
SOX1O00570 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
SOX1O00570 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SOX1O00570 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SOX1O00570 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.24■□□□□ 0.35
SOX1O00570 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SOX1O00570 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SOX1O00570 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
SOX1O00570 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 HTR7P1-202ENST00000624664 4411 ntBASIC17.23■□□□□ 0.35
SOX1O00570 Z97205.2-201ENST00000564697 1639 ntBASIC17.23■□□□□ 0.35
SOX1O00570 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SOX1O00570 MIR769-201ENST00000390225 118 ntBASIC17.23■□□□□ 0.35
SOX1O00570 C1QBPP1-201ENST00000400117 770 ntBASIC17.23■□□□□ 0.35
SOX1O00570 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 FAM197Y7-201ENST00000432892 766 ntBASIC17.23■□□□□ 0.35
SOX1O00570 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SOX1O00570 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX1O00570 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX1O00570 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX1O00570 AC078819.1-201ENST00000547454 765 ntBASIC17.23■□□□□ 0.35
SOX1O00570 AC012085.1-201ENST00000548270 765 ntBASIC17.23■□□□□ 0.35
SOX1O00570 AC120045.2-201ENST00000567334 178 ntBASIC17.23■□□□□ 0.35
SOX1O00570 AP001063.1-201ENST00000568332 529 ntBASIC17.23■□□□□ 0.35
SOX1O00570 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.23■□□□□ 0.35
SOX1O00570 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SOX1O00570 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SOX1O00570 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SOX1O00570 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX1O00570 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SOX1O00570 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX1O00570 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX1O00570 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX1O00570 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SOX1O00570 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX1O00570 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.22■□□□□ 0.35
SOX1O00570 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.22■□□□□ 0.35
SOX1O00570 RN7SL736P-201ENST00000613111 269 ntBASIC17.22■□□□□ 0.35
SOX1O00570 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.22■□□□□ 0.35
SOX1O00570 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.22■□□□□ 0.35
SOX1O00570 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SOX1O00570 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SOX1O00570 AC015818.8-201ENST00000587907 1519 ntBASIC17.21■□□□□ 0.35
SOX1O00570 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.21■□□□□ 0.35
SOX1O00570 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SOX1O00570 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms