Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CHL1O00533 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.93■□□□□ 0.94
CHL1O00533 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.93■□□□□ 0.94
CHL1O00533 ZNF890P-202ENST00000530367 1156 ntBASIC20.93■□□□□ 0.94
CHL1O00533 AL512361.1-201ENST00000554200 418 ntBASIC20.93■□□□□ 0.94
CHL1O00533 MIR3197-201ENST00000582241 73 ntBASIC20.93■□□□□ 0.94
CHL1O00533 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 AC092364.2-202ENST00000597012 1073 ntBASIC20.93■□□□□ 0.94
CHL1O00533 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHL1O00533 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHL1O00533 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.93■□□□□ 0.94
CHL1O00533 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.93■□□□□ 0.94
CHL1O00533 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.93■□□□□ 0.94
CHL1O00533 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHL1O00533 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.92■□□□□ 0.94
CHL1O00533 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 AC010336.2-201ENST00000564226 506 ntBASIC20.92■□□□□ 0.94
CHL1O00533 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHL1O00533 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHL1O00533 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHL1O00533 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.92■□□□□ 0.94
CHL1O00533 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHL1O00533 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.91■□□□□ 0.94
CHL1O00533 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.91■□□□□ 0.94
CHL1O00533 EEF1DP4-201ENST00000446006 880 ntBASIC20.91■□□□□ 0.94
CHL1O00533 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.91■□□□□ 0.94
CHL1O00533 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.91■□□□□ 0.94
CHL1O00533 MIR4745-201ENST00000577608 62 ntBASIC20.91■□□□□ 0.94
CHL1O00533 RN7SL204P-201ENST00000582831 262 ntBASIC20.91■□□□□ 0.94
CHL1O00533 AC022144.1-201ENST00000602255 1580 ntBASIC20.91■□□□□ 0.94
CHL1O00533 AL662844.4-201ENST00000606367 2838 ntBASIC20.91■□□□□ 0.94
CHL1O00533 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CHL1O00533 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHL1O00533 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHL1O00533 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.9■□□□□ 0.94
CHL1O00533 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHL1O00533 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHL1O00533 MTHFR-217ENST00000641820 1569 ntBASIC20.9■□□□□ 0.94
CHL1O00533 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHL1O00533 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.9■□□□□ 0.94
CHL1O00533 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.9■□□□□ 0.94
CHL1O00533 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 AC004987.2-201ENST00000395959 1148 ntBASIC20.9■□□□□ 0.94
CHL1O00533 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHL1O00533 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.9■□□□□ 0.94
CHL1O00533 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.9■□□□□ 0.94
CHL1O00533 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms