Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.53■□□□□ 0.08
CLIC1O00299 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLIC1O00299 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CLIC1O00299 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 AC069224.1-201ENST00000566372 1715 ntBASIC15.52■□□□□ 0.08
CLIC1O00299 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CLIC1O00299 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.52■□□□□ 0.08
CLIC1O00299 MIR1199-201ENST00000621445 119 ntBASIC15.52■□□□□ 0.08
CLIC1O00299 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.52■□□□□ 0.08
CLIC1O00299 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.52■□□□□ 0.08
CLIC1O00299 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLIC1O00299 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CLIC1O00299 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.52■□□□□ 0.07
CLIC1O00299 AL592424.1-201ENST00000563624 1536 ntBASIC15.52■□□□□ 0.07
CLIC1O00299 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CLIC1O00299 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLIC1O00299 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLIC1O00299 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLIC1O00299 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CLIC1O00299 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.51■□□□□ 0.07
CLIC1O00299 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.51■□□□□ 0.07
CLIC1O00299 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.51■□□□□ 0.07
CLIC1O00299 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 AC073648.2-201ENST00000510116 352 ntBASIC15.51■□□□□ 0.07
CLIC1O00299 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.51■□□□□ 0.07
CLIC1O00299 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.51■□□□□ 0.07
CLIC1O00299 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.51■□□□□ 0.07
CLIC1O00299 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.51■□□□□ 0.07
CLIC1O00299 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLIC1O00299 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.51■□□□□ 0.07
CLIC1O00299 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLIC1O00299 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLIC1O00299 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC1O00299 AC104640.1-201ENST00000562617 2109 ntBASIC15.5■□□□□ 0.07
CLIC1O00299 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.5■□□□□ 0.07
CLIC1O00299 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms