Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.1□□□□□ -0.47
NACAE9PAV3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 LINC00895-201ENST00000629028 1637 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.1□□□□□ -0.47
NACAE9PAV3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NACAE9PAV3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.1□□□□□ -0.47
NACAE9PAV3 AC092910.1-201ENST00000482027 1129 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.1□□□□□ -0.47
NACAE9PAV3 AC025062.2-201ENST00000605477 670 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 AC139530.3-201ENST00000620344 690 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 AC116407.3-201ENST00000623905 1129 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 AC117500.6-201ENST00000624871 588 ntBASIC12.1□□□□□ -0.47
NACAE9PAV3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NACAE9PAV3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
NACAE9PAV3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NACAE9PAV3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 BX005266.1-201ENST00000473402 457 ntBASIC12.09□□□□□ -0.47
NACAE9PAV3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 AC027601.4-201ENST00000611259 610 ntBASIC12.09□□□□□ -0.47
NACAE9PAV3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.09□□□□□ -0.47
NACAE9PAV3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
NACAE9PAV3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
NACAE9PAV3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 KRT18P27-201ENST00000427733 1299 ntBASIC12.09□□□□□ -0.47
NACAE9PAV3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.09□□□□□ -0.47
NACAE9PAV3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.09□□□□□ -0.47
NACAE9PAV3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms