Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 ADH5P3-201ENST00000433842 1137 ntBASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TIMM8BP1-201ENST00000452384 211 ntBASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 GPALPP1-207ENST00000611650 899 ntBASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 GGT3P-204ENST00000453783 1664 ntBASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SMIM9A6NGZ8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AL592309.1-201ENST00000443127 649 ntBASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 PRYP6-201ENST00000514804 343 ntBASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AC055717.3-201ENST00000622967 595 ntBASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AL513210.1-201ENST00000629608 234 ntBASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AC134684.3-201ENST00000641758 218 ntBASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM9A6NGZ8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms