Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM235A6NFC5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TMEM235A6NFC5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 DRAXINP1-201ENST00000437611 948 ntBASIC14.08□□□□□ -0.16
TMEM235A6NFC5 ABCD1P5-201ENST00000445663 754 ntBASIC14.08□□□□□ -0.16
TMEM235A6NFC5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 TPSP2-201ENST00000561760 610 ntBASIC14.08□□□□□ -0.16
TMEM235A6NFC5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM235A6NFC5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 LINC02228-204ENST00000642115 2962 ntBASIC14.07□□□□□ -0.16
TMEM235A6NFC5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 IGHV3-47-201ENST00000425060 335 ntBASIC14.07□□□□□ -0.16
TMEM235A6NFC5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 DUX4L26-201ENST00000489078 1255 ntBASIC14.07□□□□□ -0.16
TMEM235A6NFC5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TMEM235A6NFC5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms