Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 BANF1P1-201ENST00000553684 263 ntBASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TBC1D3FA6NER0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AL079307.3-201ENST00000556114 283 ntBASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AL133215.2-201ENST00000609242 977 ntBASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PCGF3-213ENST00000620529 1899 ntBASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3FA6NER0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 PIN1P1-201ENST00000412108 996 ntBASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 AC027307.3-201ENST00000594262 1100 ntBASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms