Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PALM3A6NDB9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PALM3A6NDB9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.88■□□□□ 0.61
PALM3A6NDB9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 AC140878.1-201ENST00000565277 250 ntBASIC18.88■□□□□ 0.61
PALM3A6NDB9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 AL390955.2-201ENST00000603032 514 ntBASIC18.88■□□□□ 0.61
PALM3A6NDB9 AL133215.2-201ENST00000609242 977 ntBASIC18.88■□□□□ 0.61
PALM3A6NDB9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PALM3A6NDB9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.88■□□□□ 0.61
PALM3A6NDB9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AC107890.1-201ENST00000422478 521 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 AL353705.2-201ENST00000428243 662 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AC125807.1-201ENST00000483097 614 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AC105021.1-202ENST00000570572 669 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.87■□□□□ 0.61
PALM3A6NDB9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AC084018.2-201ENST00000613093 2607 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PALM3A6NDB9 AC092364.2-201ENST00000596710 2692 ntBASIC18.87■□□□□ 0.61
PALM3A6NDB9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PALM3A6NDB9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.86■□□□□ 0.61
PALM3A6NDB9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PALM3A6NDB9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.86■□□□□ 0.61
PALM3A6NDB9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PALM3A6NDB9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PALM3A6NDB9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PALM3A6NDB9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PALM3A6NDB9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PALM3A6NDB9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PALM3A6NDB9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms