Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 AC008677.1-201ENST00000519230 1561 ntBASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 AP005901.3-202ENST00000581653 237 ntBASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 CYP2A7P1-201ENST00000595391 815 ntBASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 AC007292.2-201ENST00000593524 1812 ntBASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRDV1A0A1B0GX56 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AL137013.1-201ENST00000432946 1228 ntBASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 KRT8P26-201ENST00000534154 1276 ntBASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 AC011498.5-201ENST00000592027 486 ntBASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 REXO1L3P-201ENST00000622202 1288 ntBASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 TMEM191A-211ENST00000637163 1067 ntBASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRDV1A0A1B0GX56 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 LINC01101-201ENST00000622953 1884 ntBASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 AC113347.1-201ENST00000413321 391 ntBASIC14.46□□□□□ -0.09
TRDV1A0A1B0GX56 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms