Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AC005052.1-201ENST00000625181 2492 ntBASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AC004967.1-201ENST00000453589 447 ntBASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 AC009336.1-201ENST00000608941 1553 ntBASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX49Q9Y6V7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 VN2R19P-201ENST00000442399 1052 ntBASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 HCG4B-203ENST00000450128 991 ntBASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 IGHV3-65-201ENST00000523210 341 ntBASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 OR7E47P-204ENST00000575924 449 ntBASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 FRMD8P1-201ENST00000440433 1524 ntBASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX49Q9Y6V7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 CRYGEP-201ENST00000412192 528 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 DNAJB3-202ENST00000449667 1266 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 IGHV3-52-201ENST00000519770 353 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MIR3687-2-201ENST00000577708 61 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 AC008667.4-201ENST00000607370 168 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 AL596442.2-201ENST00000610240 980 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MIR3687-1-201ENST00000614492 61 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 PGM5P2-202ENST00000637225 1043 ntBASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX49Q9Y6V7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms