Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 SPTSSB-204ENST00000617024 1292 ntBASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 AL512652.2-201ENST00000625156 1716 ntBASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AC092580.3-201ENST00000430932 139 ntBASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB2Q9Y5E7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 AL035633.1-201ENST00000406139 838 ntBASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 AC098859.1-201ENST00000502915 1238 ntBASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 AC007967.4-201ENST00000614700 386 ntBASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB2Q9Y5E7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 UGT1A2P-201ENST00000454886 866 ntBASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 AC138761.1-201ENST00000584393 385 ntBASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB2Q9Y5E7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms