Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 RPS2P28-201ENST00000314255 741 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 AC004870.1-201ENST00000315132 882 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 AL450487.1-201ENST00000426799 995 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 DUSP5P1-201ENST00000441325 1139 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 EMBP1-201ENST00000458200 901 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.09□□□□□ -0.47
HHLA3Q9XRX5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
HHLA3Q9XRX5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AC021087.4-201ENST00000563761 564 ntBASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AL121912.1-201ENST00000603683 238 ntBASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AL353135.1-201ENST00000606729 504 ntBASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 AL590787.1-201ENST00000568856 1315 ntBASIC12.08□□□□□ -0.48
HHLA3Q9XRX5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 AL021920.2-201ENST00000624828 1351 ntBASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HHLA3Q9XRX5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 982.2 ms