Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 AC133539.2-201ENST00000604757 467 ntBASIC18.54■□□□□ 0.56
CPA4Q9UI42 AL022328.1-201ENST00000610050 478 ntBASIC18.54■□□□□ 0.56
CPA4Q9UI42 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CPA4Q9UI42 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPA4Q9UI42 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.54■□□□□ 0.56
CPA4Q9UI42 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ACTG1P3-201ENST00000431775 1114 ntBASIC18.53■□□□□ 0.56
CPA4Q9UI42 AL162726.2-201ENST00000438986 1017 ntBASIC18.53■□□□□ 0.56
CPA4Q9UI42 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPA4Q9UI42 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CPA4Q9UI42 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AL645728.1-201ENST00000366221 2101 ntBASIC18.52■□□□□ 0.56
CPA4Q9UI42 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 RNA5SP412-201ENST00000516234 123 ntBASIC18.52■□□□□ 0.56
CPA4Q9UI42 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC036164.1-201ENST00000570544 333 ntBASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AL391069.4-201ENST00000609583 481 ntBASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.52■□□□□ 0.56
CPA4Q9UI42 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPA4Q9UI42 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPA4Q9UI42 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPA4Q9UI42 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPA4Q9UI42 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.52■□□□□ 0.55
CPA4Q9UI42 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CPA4Q9UI42 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CPA4Q9UI42 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CPA4Q9UI42 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms