Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLIP2Q9UDT6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 MIR346-201ENST00000362234 95 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AC093512.1-201ENST00000617969 520 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 Z92544.3-201ENST00000624747 417 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AC084121.4-201ENST00000641598 221 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 AF228730.8-201ENST00000642140 221 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 KRT8P39-201ENST00000396270 1433 ntBASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.48■□□□□ 0.71
CLIP2Q9UDT6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 KRT18P34-201ENST00000488218 1270 ntBASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 AP000842.3-202ENST00000569238 1080 ntBASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms