Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RDH8Q9NYR8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RDH8Q9NYR8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.29□□□□□ -0.12
RDH8Q9NYR8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.29□□□□□ -0.12
RDH8Q9NYR8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
RDH8Q9NYR8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 RCN1P1-201ENST00000400413 996 ntBASIC14.28□□□□□ -0.12
RDH8Q9NYR8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 AC009336.1-201ENST00000608941 1553 ntBASIC14.28□□□□□ -0.12
RDH8Q9NYR8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 AL135999.2-201ENST00000622438 1686 ntBASIC14.28□□□□□ -0.12
RDH8Q9NYR8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RDH8Q9NYR8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.27□□□□□ -0.12
RDH8Q9NYR8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RDH8Q9NYR8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 AC003669.1-201ENST00000334569 611 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 TMPOP1-202ENST00000424642 1267 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 BX276092.5-203ENST00000456199 560 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 AC013268.4-201ENST00000637413 2228 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 PTENP1-202ENST00000532280 3996 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 ALOX12P2-203ENST00000570921 1945 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.27□□□□□ -0.13
RDH8Q9NYR8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RDH8Q9NYR8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.26□□□□□ -0.13
RDH8Q9NYR8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RDH8Q9NYR8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms