Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 AC022210.1-201ENST00000449856 793 ntBASIC17.33■□□□□ 0.36
TLR9Q9NR96 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 AC123567.1-201ENST00000548294 1261 ntBASIC17.33■□□□□ 0.36
TLR9Q9NR96 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 AL109936.8-201ENST00000641772 604 ntBASIC17.33■□□□□ 0.36
TLR9Q9NR96 AL139011.1-202ENST00000642063 584 ntBASIC17.33■□□□□ 0.36
TLR9Q9NR96 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 AC092068.3-201ENST00000587894 2016 ntBASIC17.33■□□□□ 0.36
TLR9Q9NR96 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
TLR9Q9NR96 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TLR9Q9NR96 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 AC141586.5-201ENST00000624546 2050 ntBASIC17.32■□□□□ 0.36
TLR9Q9NR96 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 ELK1P1-201ENST00000485699 580 ntBASIC17.32■□□□□ 0.36
TLR9Q9NR96 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 AC124067.4-201ENST00000519691 2379 ntBASIC17.32■□□□□ 0.36
TLR9Q9NR96 PCDHB17P-201ENST00000539533 2393 ntBASIC17.32■□□□□ 0.36
TLR9Q9NR96 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TLR9Q9NR96 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TLR9Q9NR96 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TLR9Q9NR96 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.31■□□□□ 0.36
TLR9Q9NR96 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms