Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 AC074386.1-202ENST00000463561 864 ntBASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 AC091167.2-201ENST00000579581 588 ntBASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NECTIN3Q9NQS3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 RNF216P1-203ENST00000404404 2427 ntBASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 AC131009.4-201ENST00000624048 1740 ntBASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 AC012569.1-201ENST00000591191 1524 ntBASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NECTIN3Q9NQS3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AC092171.3-201ENST00000610122 2651 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 HMGA1P7-201ENST00000406908 502 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 MCCD1P2-201ENST00000423228 335 ntBASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.79■□□□□ 0.12
NECTIN3Q9NQS3 AL031432.2-201ENST00000566714 459 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms