Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 AC116407.2-201ENST00000613639 860 ntBASIC19.55■□□□□ 0.72
RTN4Q9NQC3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RTN4Q9NQC3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 KRT17P2-201ENST00000300992 1314 ntBASIC19.54■□□□□ 0.72
RTN4Q9NQC3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 SNORA78-201ENST00000459373 127 ntBASIC19.54■□□□□ 0.72
RTN4Q9NQC3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RTN4Q9NQC3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 AL512604.3-201ENST00000569583 964 ntBASIC19.53■□□□□ 0.72
RTN4Q9NQC3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 KRT8P47-201ENST00000604727 1398 ntBASIC19.53■□□□□ 0.72
RTN4Q9NQC3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTN4Q9NQC3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 DDX43P3-201ENST00000441064 443 ntBASIC19.52■□□□□ 0.72
RTN4Q9NQC3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 ECEL1P2-202ENST00000465689 757 ntBASIC19.52■□□□□ 0.72
RTN4Q9NQC3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTN4Q9NQC3 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms