Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.84□□□□□ -0.03
NRIP3Q9NQ35 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NRIP3Q9NQ35 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PRSS29P-201ENST00000440800 595 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AC148477.8-201ENST00000624298 468 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AC117500.6-201ENST00000624871 588 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 FAM215A-202ENST00000632077 792 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 AC010491.1-201ENST00000563101 2797 ntBASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NRIP3Q9NQ35 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NRIP3Q9NQ35 AL513477.1-201ENST00000602865 2407 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms