Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 AC105917.1-201ENST00000506637 2539 ntBASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRCC1Q9NPI7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 FGFR3P6-201ENST00000457012 610 ntBASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SART3-203ENST00000546611 1184 ntBASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KRCC1Q9NPI7 MYO15B-237ENST00000642007 4893 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms