Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 AC009477.1-201ENST00000452936 217 ntBASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 RN7SL828P-201ENST00000607615 303 ntBASIC14.53□□□□□ -0.08
KIAA1549Q9HCM3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KIAA1549Q9HCM3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 RPL37AP1-201ENST00000412502 279 ntBASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 EEF1DP4-201ENST00000446006 880 ntBASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KIAA1549Q9HCM3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC124067.4-201ENST00000519691 2379 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 RNA5SP421-201ENST00000516864 134 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AL079307.3-201ENST00000556114 283 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms