Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 AC024681.1-201ENST00000521917 487 ntBASIC14.98□□□□□ -0.01
CHD8Q9HCK8 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 REXO1L8P-201ENST00000604378 1897 ntBASIC14.98□□□□□ -0.01
CHD8Q9HCK8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 AL133466.1-201ENST00000447582 150 ntBASIC14.98□□□□□ -0.01
CHD8Q9HCK8 AL139010.1-201ENST00000454878 894 ntBASIC14.98□□□□□ -0.01
CHD8Q9HCK8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHD8Q9HCK8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 TOMM22P5-201ENST00000416399 439 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AC012317.2-201ENST00000623305 2251 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AC007274.2-201ENST00000421675 662 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 IGLV3-15-201ENST00000518356 244 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 EIF5AP2-201ENST00000585668 1047 ntBASIC14.97□□□□□ -0.01
CHD8Q9HCK8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.97□□□□□ -0.01
CHD8Q9HCK8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 FZD10-202ENST00000539839 3282 ntBASIC14.96□□□□□ -0.01
CHD8Q9HCK8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.96□□□□□ -0.01
CHD8Q9HCK8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms