Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 AC136632.2-201ENST00000512891 861 ntBASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 PGM5P2-202ENST00000637225 1043 ntBASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AKR1C7P-201ENST00000305623 895 ntBASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AC008667.4-201ENST00000607370 168 ntBASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.25■□□□□ 0.03
POLR2J3Q9H1A7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 AC073621.1-201ENST00000392730 636 ntBASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 AC073648.2-201ENST00000510116 352 ntBASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 OR7E14P-202ENST00000530490 1290 ntBASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 AC010654.1-201ENST00000615722 808 ntBASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
POLR2J3Q9H1A7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms