Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SPDYE7P-202ENST00000420373 878 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 HNRNPA3P5-201ENST00000455201 833 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC105233.2-201ENST00000523697 349 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AF228730.5-201ENST00000530288 346 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC073389.1-201ENST00000595595 795 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AL133215.2-201ENST00000609242 977 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SPTSSB-204ENST00000617024 1292 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AJ011932.1-201ENST00000621707 465 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC004840.1-201ENST00000636359 365 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AF228730.6-201ENST00000641497 218 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC084121.3-201ENST00000641716 218 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC105233.6-201ENST00000642093 218 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 AC005622.1-201ENST00000636801 1703 ntBASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms