Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 MPDU1-223ENST00000582151 728 ntBASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 AC068418.2-201ENST00000577309 3703 ntBASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
THUMPD3Q9BV44 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AC008608.2-201ENST00000606089 416 ntBASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 REXO1L6P-202ENST00000619970 1078 ntBASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AL356309.3-201ENST00000624132 1934 ntBASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 AC103702.1-201ENST00000548801 2630 ntBASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
THUMPD3Q9BV44 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 NKAPP1-205ENST00000585790 367 ntBASIC15.77■□□□□ 0.12
THUMPD3Q9BV44 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms