Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 IGLL3P-201ENST00000412472 434 ntBASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
YIPF4Q9BSR8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 PCGF3-213ENST00000620529 1899 ntBASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 MED15P5-201ENST00000423150 992 ntBASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 MIR4515-201ENST00000584082 81 ntBASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 AC027601.4-201ENST00000611259 610 ntBASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF4Q9BSR8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
YIPF4Q9BSR8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
YIPF4Q9BSR8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF4Q9BSR8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.51■□□□□ 0.07
YIPF4Q9BSR8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF4Q9BSR8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms