Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AP001160.2-201ENST00000596071 487 ntBASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 AC012569.1-201ENST00000591191 1524 ntBASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 AC092183.1-201ENST00000469884 875 ntBASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 MIR4515-201ENST00000584082 81 ntBASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 REXO1L3P-201ENST00000622202 1288 ntBASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.85□□□□□ -0.19
PCGF1Q9BSM1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AL603756.1-201ENST00000606511 2163 ntBASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 YBX1P5-201ENST00000509441 847 ntBASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.84□□□□□ -0.19
PCGF1Q9BSM1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms