Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS2Q99743 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.16■□□□□ 0.18
NPAS2Q99743 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 AC034105.1-201ENST00000563488 319 ntBASIC16.16■□□□□ 0.18
NPAS2Q99743 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.16■□□□□ 0.18
NPAS2Q99743 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.16■□□□□ 0.18
NPAS2Q99743 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS2Q99743 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.16■□□□□ 0.18
NPAS2Q99743 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS2Q99743 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 AC126177.1-201ENST00000547829 2218 ntBASIC16.15■□□□□ 0.18
NPAS2Q99743 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.15■□□□□ 0.18
NPAS2Q99743 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.15■□□□□ 0.18
NPAS2Q99743 POLD2P1-201ENST00000511220 997 ntBASIC16.15■□□□□ 0.18
NPAS2Q99743 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 KRT18P58-201ENST00000527480 1120 ntBASIC16.15■□□□□ 0.18
NPAS2Q99743 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.15■□□□□ 0.18
NPAS2Q99743 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.15■□□□□ 0.18
NPAS2Q99743 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS2Q99743 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NPAS2Q99743 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS2Q99743 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS2Q99743 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
NPAS2Q99743 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NPAS2Q99743 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.14■□□□□ 0.18
NPAS2Q99743 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 MST1L-201ENST00000442552 2185 ntBASIC16.14■□□□□ 0.17
NPAS2Q99743 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS2Q99743 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.14■□□□□ 0.17
NPAS2Q99743 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS2Q99743 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.14■□□□□ 0.17
NPAS2Q99743 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.14■□□□□ 0.17
NPAS2Q99743 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS2Q99743 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.14■□□□□ 0.17
NPAS2Q99743 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS2Q99743 UNC93B6-202ENST00000528242 690 ntBASIC16.14■□□□□ 0.17
NPAS2Q99743 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms