Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
RAD9AQ99638 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD9AQ99638 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAD9AQ99638 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
RAD9AQ99638 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAD9AQ99638 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD9AQ99638 AC092068.3-201ENST00000587894 2016 ntBASIC17.4■□□□□ 0.38
RAD9AQ99638 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD9AQ99638 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.39■□□□□ 0.38
RAD9AQ99638 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAD9AQ99638 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.39■□□□□ 0.38
RAD9AQ99638 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RAD9AQ99638 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAD9AQ99638 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RAD9AQ99638 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAD9AQ99638 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAD9AQ99638 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 HIST3H2BA-201ENST00000436555 524 ntBASIC17.39■□□□□ 0.37
RAD9AQ99638 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAD9AQ99638 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD9AQ99638 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.39■□□□□ 0.37
RAD9AQ99638 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.39■□□□□ 0.37
RAD9AQ99638 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD9AQ99638 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAD9AQ99638 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.39■□□□□ 0.37
RAD9AQ99638 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAD9AQ99638 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 AC093525.8-201ENST00000624099 1342 ntBASIC17.39■□□□□ 0.37
RAD9AQ99638 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RAD9AQ99638 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAD9AQ99638 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD9AQ99638 KRT8P22-201ENST00000562317 1415 ntBASIC17.38■□□□□ 0.37
RAD9AQ99638 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAD9AQ99638 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD9AQ99638 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.38■□□□□ 0.37
RAD9AQ99638 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD9AQ99638 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAD9AQ99638 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD9AQ99638 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.38■□□□□ 0.37
RAD9AQ99638 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.38■□□□□ 0.37
RAD9AQ99638 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.38■□□□□ 0.37
RAD9AQ99638 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD9AQ99638 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RAD9AQ99638 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.38■□□□□ 0.37
RAD9AQ99638 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD9AQ99638 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RAD9AQ99638 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.37■□□□□ 0.37
RAD9AQ99638 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.37■□□□□ 0.37
RAD9AQ99638 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms