Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A3Q99624 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A3Q99624 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC38A3Q99624 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A3Q99624 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A3Q99624 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AC241585.1-201ENST00000433527 519 ntBASIC15.91■□□□□ 0.14
SLC38A3Q99624 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AL603756.1-201ENST00000606511 2163 ntBASIC15.91■□□□□ 0.14
SLC38A3Q99624 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.91■□□□□ 0.14
SLC38A3Q99624 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AL031731.1-201ENST00000642131 2094 ntBASIC15.91■□□□□ 0.14
SLC38A3Q99624 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 AC006538.1-201ENST00000567905 1585 ntBASIC15.91■□□□□ 0.14
SLC38A3Q99624 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A3Q99624 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A3Q99624 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 AC005915.1-201ENST00000624912 2018 ntBASIC15.9■□□□□ 0.14
SLC38A3Q99624 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 AL035456.1-201ENST00000456064 1369 ntBASIC15.9■□□□□ 0.14
SLC38A3Q99624 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 AC092580.3-201ENST00000430932 139 ntBASIC15.9■□□□□ 0.14
SLC38A3Q99624 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 TSPY16P-201ENST00000449843 468 ntBASIC15.9■□□□□ 0.14
SLC38A3Q99624 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 HLA-J-202ENST00000469281 1241 ntBASIC15.9■□□□□ 0.14
SLC38A3Q99624 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A3Q99624 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A3Q99624 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 AC046158.3-201ENST00000624947 2558 ntBASIC15.89■□□□□ 0.13
SLC38A3Q99624 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.89■□□□□ 0.13
SLC38A3Q99624 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms