Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA3Q99618 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA3Q99618 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.9■□□□□ 0.3
CDCA3Q99618 AC005622.1-201ENST00000636801 1703 ntBASIC16.9■□□□□ 0.3
CDCA3Q99618 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDCA3Q99618 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDCA3Q99618 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA3Q99618 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CDCA3Q99618 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA3Q99618 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA3Q99618 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA3Q99618 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDCA3Q99618 AC138932.1-201ENST00000534164 6830 ntBASIC16.89■□□□□ 0.29
CDCA3Q99618 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDCA3Q99618 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDCA3Q99618 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDCA3Q99618 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA3Q99618 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA3Q99618 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.89■□□□□ 0.29
CDCA3Q99618 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 GPR182-203ENST00000622922 591 ntBASIC16.89■□□□□ 0.29
CDCA3Q99618 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
CDCA3Q99618 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDCA3Q99618 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDCA3Q99618 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDCA3Q99618 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.88■□□□□ 0.29
CDCA3Q99618 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDCA3Q99618 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CDCA3Q99618 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.88■□□□□ 0.29
CDCA3Q99618 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 BCYRN1-201ENST00000418539 200 ntBASIC16.88■□□□□ 0.29
CDCA3Q99618 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.88■□□□□ 0.29
CDCA3Q99618 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 PFN1P12-201ENST00000455938 534 ntBASIC16.88■□□□□ 0.29
CDCA3Q99618 FAM86LP-201ENST00000478302 853 ntBASIC16.88■□□□□ 0.29
CDCA3Q99618 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.88■□□□□ 0.29
CDCA3Q99618 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.88■□□□□ 0.29
CDCA3Q99618 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 AP000812.2-201ENST00000538934 718 ntBASIC16.88■□□□□ 0.29
CDCA3Q99618 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.88■□□□□ 0.29
CDCA3Q99618 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDCA3Q99618 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.88■□□□□ 0.29
CDCA3Q99618 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDCA3Q99618 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.88■□□□□ 0.29
CDCA3Q99618 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDCA3Q99618 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDCA3Q99618 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDCA3Q99618 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDCA3Q99618 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDCA3Q99618 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.87■□□□□ 0.29
CDCA3Q99618 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms