Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 MCCD1P2-201ENST00000423228 335 ntBASIC19.44■□□□□ 0.7
NEK1Q96PY6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.44■□□□□ 0.7
NEK1Q96PY6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEK1Q96PY6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 MIR1233-2-201ENST00000408138 82 ntBASIC19.43■□□□□ 0.7
NEK1Q96PY6 MIR1233-1-201ENST00000408722 82 ntBASIC19.43■□□□□ 0.7
NEK1Q96PY6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 RARRES2P8-201ENST00000566335 367 ntBASIC19.43■□□□□ 0.7
NEK1Q96PY6 AC002347.1-201ENST00000569543 541 ntBASIC19.43■□□□□ 0.7
NEK1Q96PY6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEK1Q96PY6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEK1Q96PY6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 FAM58CP-201ENST00000435741 640 ntBASIC19.42■□□□□ 0.7
NEK1Q96PY6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 AC092902.6-201ENST00000641783 218 ntBASIC19.42■□□□□ 0.7
NEK1Q96PY6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.42■□□□□ 0.7
NEK1Q96PY6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEK1Q96PY6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 AC024909.3-201ENST00000611513 2257 ntBASIC19.41■□□□□ 0.7
NEK1Q96PY6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 AC008741.2-201ENST00000612792 3115 ntBASIC19.41■□□□□ 0.7
NEK1Q96PY6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEK1Q96PY6 AC004832.2-201ENST00000426397 482 ntBASIC19.41■□□□□ 0.7
NEK1Q96PY6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.41■□□□□ 0.7
NEK1Q96PY6 AL603832.2-201ENST00000566195 2125 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms