Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 U82695.1-201ENST00000635752 1889 ntBASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 AC092474.2-201ENST00000424288 719 ntBASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 KRT18P3-201ENST00000451602 1288 ntBASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A4EQ96PG1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AC092919.2-201ENST00000623631 1645 ntBASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 FER1L4-210ENST00000615531 5998 ntBASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AC016027.1-202ENST00000607927 1699 ntBASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AC074386.1-202ENST00000463561 864 ntBASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 AL161645.1-201ENST00000622716 1255 ntBASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A4EQ96PG1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 AL596257.1-201ENST00000641463 2694 ntBASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A4EQ96PG1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms