Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC073439.1-201ENST00000624121 1774 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 DGCR5-201ENST00000399539 862 ntBASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 HILS1-202ENST00000545329 423 ntBASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 AC104794.3-201ENST00000566840 1248 ntBASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC46A1Q96NT5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AC006277.1-201ENST00000624348 1610 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AP006294.1-201ENST00000415407 339 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 GNAQP1-201ENST00000444815 1067 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 INE1-201ENST00000456273 945 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 RN7SL752P-201ENST00000463779 287 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL079307.3-201ENST00000556114 283 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL133215.2-201ENST00000609242 977 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 MIR6799-201ENST00000620297 69 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 AL391256.1-201ENST00000443260 1855 ntBASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms