Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NBPF4Q96M43 AC022210.1-201ENST00000449856 793 ntBASIC21.42■■□□□ 1.02
NBPF4Q96M43 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.42■■□□□ 1.02
NBPF4Q96M43 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NBPF4Q96M43 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 RAB43P1-201ENST00000561790 589 ntBASIC21.41■■□□□ 1.02
NBPF4Q96M43 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 MIR4259-201ENST00000584466 101 ntBASIC21.41■■□□□ 1.02
NBPF4Q96M43 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 TMEM261P1-201ENST00000604899 340 ntBASIC21.41■■□□□ 1.02
NBPF4Q96M43 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NBPF4Q96M43 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 HLA-A-202ENST00000376806 1854 ntBASIC21.41■■□□□ 1.02
NBPF4Q96M43 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.41■■□□□ 1.02
NBPF4Q96M43 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 MIR658-201ENST00000385210 100 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 RPS2P32-201ENST00000439199 892 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 AC119751.2-201ENST00000504529 210 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 AL512343.1-201ENST00000605837 169 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 AL365330.1-201ENST00000607459 531 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 RPSAP52-203ENST00000622976 1023 ntBASIC21.4■■□□□ 1.02
NBPF4Q96M43 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NBPF4Q96M43 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.4■■□□□ 1.02
NBPF4Q96M43 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
NBPF4Q96M43 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF4Q96M43 AC009053.2-201ENST00000563701 2365 ntBASIC21.39■■□□□ 1.02
NBPF4Q96M43 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF4Q96M43 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NBPF4Q96M43 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
NBPF4Q96M43 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
NBPF4Q96M43 LETM1P2-201ENST00000597330 2178 ntBASIC21.39■■□□□ 1.01
NBPF4Q96M43 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF4Q96M43 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 RARRES2P5-201ENST00000564013 466 ntBASIC21.39■■□□□ 1.01
NBPF4Q96M43 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.39■■□□□ 1.01
NBPF4Q96M43 AL391069.4-201ENST00000609583 481 ntBASIC21.39■■□□□ 1.01
NBPF4Q96M43 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF4Q96M43 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NBPF4Q96M43 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms