Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC092053.1-201ENST00000605787 1936 ntBASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AL353779.1-201ENST00000434793 351 ntBASIC19.18■□□□□ 0.66
TRIM47Q96LD4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM47Q96LD4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AC005915.1-201ENST00000624912 2018 ntBASIC19.17■□□□□ 0.66
TRIM47Q96LD4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 INE1-201ENST00000456273 945 ntBASIC19.17■□□□□ 0.66
TRIM47Q96LD4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM47Q96LD4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM47Q96LD4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms