Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PCED1CP-201ENST00000419887 785 ntBASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AC106795.1-205ENST00000512851 1056 ntBASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PGM5P2-202ENST00000637225 1043 ntBASIC15.68■□□□□ 0.1
LRRC58Q96CX6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PI4KAP1-204ENST00000612579 1703 ntBASIC15.68■□□□□ 0.1
LRRC58Q96CX6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 AL592424.1-201ENST00000563624 1536 ntBASIC15.68■□□□□ 0.1
LRRC58Q96CX6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC58Q96CX6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 PTCHD3P3-201ENST00000403073 906 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 KRT16P4-201ENST00000453883 522 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 SLC25A6P2-201ENST00000497974 877 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 AC087641.1-201ENST00000557561 1021 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 AC087388.1-201ENST00000571370 1112 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 AL139288.1-201ENST00000623748 933 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 AP001350.2-201ENST00000625104 1094 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC58Q96CX6 TNRC18P2-201ENST00000417666 2714 ntBASIC15.67■□□□□ 0.1
LRRC58Q96CX6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 AC139887.3-201ENST00000568585 713 ntBASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms