Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AC079140.1-201ENST00000508039 487 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 YBX1P5-201ENST00000509441 847 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 MIR4469-201ENST00000583919 79 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AC027307.2-201ENST00000591252 911 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 AC073389.1-201ENST00000595595 795 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 AL589702.1-201ENST00000641229 1509 ntBASIC17.65■□□□□ 0.42
SEMA4DQ92854 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
SEMA4DQ92854 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEMA4DQ92854 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SEMA4DQ92854 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SEMA4DQ92854 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 UPF3AP3-201ENST00000420996 769 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 ACTG1P14-201ENST00000446382 1122 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 DNAJB3-201ENST00000446806 729 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 CEND1P1-201ENST00000451006 455 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 TIMM8BP1-201ENST00000452384 211 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 FAM86C2P-203ENST00000528684 1004 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 U82695.1-201ENST00000635752 1889 ntBASIC17.64■□□□□ 0.41
SEMA4DQ92854 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEMA4DQ92854 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.64■□□□□ 0.41
SEMA4DQ92854 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 SPDYE11-202ENST00000450699 704 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 SPDYE9P-201ENST00000570642 692 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 SPDYE10P-202ENST00000612005 668 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 SPDYE8P-202ENST00000612377 668 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 AC105339.1-204ENST00000636249 355 ntBASIC17.63■□□□□ 0.41
SEMA4DQ92854 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEMA4DQ92854 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SEMA4DQ92854 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms